With the evolution of natural species and the progress of agricultural science and technology over the past thousands of years, the world’s agricultural breeding has experienced three epochal leaps from primitive breeding to traditional breeding, and then to molecular breeding. Biological breeding is the abbreviation of “biotechnology breeding”, and belongs to a new generation of molecular breeding technology that integrates all kinds of cutting?edge technologies from transgenic breeding 3.0 to intelligent design breeding 4.0. Among them, the most representative technologies include genome?wide selection, genomic editing and synthetic biotechnology for breeding revolutionary and disruptive agricultural new varieties. This paper systematically reviewed the development course of agricultural transgenic breeding and biotechnology breeding at home and abroad, analyzed the severe challenges faced by China’s biological breeding, and put forward the countermeasures to accelerate the innovation and industrialization of biological breeding in China.