Current Biotechnology ›› 2024, Vol. 14 ›› Issue (6): 980-992.DOI: 10.19586/j.2095-2341.2024.0084
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Caihua LI(
), Yankun ZHAO, Zhankun LI, Zilong SHAN, Qiao CAO, Liang MA, Fei WANG, Zhenxian GAO(
)
Received:2024-04-15
Accepted:2024-05-20
Online:2024-11-25
Published:2024-12-27
Contact:
Zhenxian GAO
李彩华(
), 赵彦坤, 李占坤, 单子龙, 曹巧, 马亮, 王飞, 高振贤(
)
通讯作者:
高振贤
作者简介:李彩华 E-mail: licaihua415@126.com;
基金资助:CLC Number:
Caihua LI, Yankun ZHAO, Zhankun LI, Zilong SHAN, Qiao CAO, Liang MA, Fei WANG, Zhenxian GAO. Research Progress on Rht Genes in Wheat[J]. Current Biotechnology, 2024, 14(6): 980-992.
李彩华, 赵彦坤, 李占坤, 单子龙, 曹巧, 马亮, 王飞, 高振贤. 小麦矮秆基因研究进展[J]. 生物技术进展, 2024, 14(6): 980-992.
| 基因 | 等位变异 | 染色体 | 核苷酸变化a | 效应b | 参考文献 |
|---|---|---|---|---|---|
| Rht-A1 | Rht-A1a | 4A | 野生型 | - | [ |
| Rht-A1b | 4A | G994A | G332S | [ | |
| Rht-A1c | 4A | C1430A | S477Y | [ | |
| Rht-A1d | 4A | G817A,C818T | A273I | [ | |
| Rht-A1e | 4A | A(-33)G | 5′-非编码 | [ | |
| Rht-A1f | 4A | C420G | P140= | [ | |
| Rht-A1g | 4A | T565A | S189T | [ | |
| Rht-B1 | Rht-B1a | 4B | 野生型 | - | [ |
| Rht-B1b(Rht1) | 4B | C190T | Q64* | [ | |
| Rht-B1c | 4B | G43C, G75A, Veju插入 | G15R, M25I, 30 K49后添加230个残留物 | [ | |
| Rht-B1d | 4B | C190T | Q64* | [ | |
| Rht-B1e | 4B | A181T | K61* | [ | |
| Rht-B1f | 4B | - | - | [ | |
| Rht-B1g | 4B | - | - | [ | |
| Rht-B1h | 4B | G43C、G75A、A723G、A1761C、 T1877: | G15R、M25I、A241=、A587= | [ |
Table 1 The information of Rht-1 locus
| 基因 | 等位变异 | 染色体 | 核苷酸变化a | 效应b | 参考文献 |
|---|---|---|---|---|---|
| Rht-A1 | Rht-A1a | 4A | 野生型 | - | [ |
| Rht-A1b | 4A | G994A | G332S | [ | |
| Rht-A1c | 4A | C1430A | S477Y | [ | |
| Rht-A1d | 4A | G817A,C818T | A273I | [ | |
| Rht-A1e | 4A | A(-33)G | 5′-非编码 | [ | |
| Rht-A1f | 4A | C420G | P140= | [ | |
| Rht-A1g | 4A | T565A | S189T | [ | |
| Rht-B1 | Rht-B1a | 4B | 野生型 | - | [ |
| Rht-B1b(Rht1) | 4B | C190T | Q64* | [ | |
| Rht-B1c | 4B | G43C, G75A, Veju插入 | G15R, M25I, 30 K49后添加230个残留物 | [ | |
| Rht-B1d | 4B | C190T | Q64* | [ | |
| Rht-B1e | 4B | A181T | K61* | [ | |
| Rht-B1f | 4B | - | - | [ | |
| Rht-B1g | 4B | - | - | [ | |
| Rht-B1h | 4B | G43C、G75A、A723G、A1761C、 T1877: | G15R、M25I、A241=、A587= | [ |
| 基因 | 染色体 | 编码基因 | 突变来源 | 是否GA敏感 | 是否克隆 | 克隆方法 | 参考文献 |
|---|---|---|---|---|---|---|---|
| Rht4 | 2BL | - | Burt 经伽马射线辐射 | 是 | 否 | [ | |
| Rht5 | 3BS | - | Marfed经EMS诱变 | 是 | 是 | 图位克隆 | [ |
| Rht8 | 2DS | RNase H-like蛋白 | 京411经EMS诱变混合群体分离分析 | 是 | 是 | 混合群体分离分析 | [ |
| Rht9 | 5AL或者7B | - | Mai 18 和 Mara重组自交系 | 是 | 否 | [ | |
| Rht12 | 5A | GA2-b-双加氧酶(GA2oxA13) | γ射线诱变获得Karcagi 522M7K | 是 | 是 | 混池转录组测序 | [ |
| Rht13 | 7BL | NB-LRR | ‘Chuanmai 18’和‘Magnif M1’重组自交系 | 是 | 是 | 图位克隆结合测序 | [ |
| Rht14 | 6AS | - | 栽培种 | 是 | 否 | - | [ |
| Rht15 | 未知 | - | 经EMS诱变获得‘Durox’ | - | 否 | - | [ |
| Rht17 | 未知 | - | ‘Chirs’经DES诱变 | - | 否 | - | [ |
| Rht18 | 6A | GA2oxA9 | ‘Icaro’经叠氮化钠诱变 | 是 | 是 | 图位克隆结合测序 | [ |
| Rht19 | 未知 | - | ‘Vic’经EMS诱变 | - | 否 | - | [ |
| Rht20 | 未知 | - | ‘Burt’经γ-射线诱变 | - | 否 | - | [ |
| Rht22 | 7AS | - | dwarf Polish wheat和 JAM重组自交系 | - | 否 | 图位克隆 | [ |
| Rht23 | 5DL | AP2 转录因子 | NAUH164(‘苏麦3’经EMS诱变) | - | 是 | 图位克隆 | [ |
| Rht24 | 6A | GA2oxA9 | ‘京冬8号’和‘矮抗58’重组自交系 | 是 | 是 | 图位克隆 | [ |
| Rht25 | 6AS | PLATZ-A1 | ‘UC1110’和‘PI610750’重组自交系 | 是 | 是 | 图位克隆 | [ |
| Rht26 | 3DL | - | ‘中麦175’和‘轮选987’重组自交系 | - | 是 | 图位克隆 | [ |
Table 2 GA sensitive dwarf genes and other dwarf genes
| 基因 | 染色体 | 编码基因 | 突变来源 | 是否GA敏感 | 是否克隆 | 克隆方法 | 参考文献 |
|---|---|---|---|---|---|---|---|
| Rht4 | 2BL | - | Burt 经伽马射线辐射 | 是 | 否 | [ | |
| Rht5 | 3BS | - | Marfed经EMS诱变 | 是 | 是 | 图位克隆 | [ |
| Rht8 | 2DS | RNase H-like蛋白 | 京411经EMS诱变混合群体分离分析 | 是 | 是 | 混合群体分离分析 | [ |
| Rht9 | 5AL或者7B | - | Mai 18 和 Mara重组自交系 | 是 | 否 | [ | |
| Rht12 | 5A | GA2-b-双加氧酶(GA2oxA13) | γ射线诱变获得Karcagi 522M7K | 是 | 是 | 混池转录组测序 | [ |
| Rht13 | 7BL | NB-LRR | ‘Chuanmai 18’和‘Magnif M1’重组自交系 | 是 | 是 | 图位克隆结合测序 | [ |
| Rht14 | 6AS | - | 栽培种 | 是 | 否 | - | [ |
| Rht15 | 未知 | - | 经EMS诱变获得‘Durox’ | - | 否 | - | [ |
| Rht17 | 未知 | - | ‘Chirs’经DES诱变 | - | 否 | - | [ |
| Rht18 | 6A | GA2oxA9 | ‘Icaro’经叠氮化钠诱变 | 是 | 是 | 图位克隆结合测序 | [ |
| Rht19 | 未知 | - | ‘Vic’经EMS诱变 | - | 否 | - | [ |
| Rht20 | 未知 | - | ‘Burt’经γ-射线诱变 | - | 否 | - | [ |
| Rht22 | 7AS | - | dwarf Polish wheat和 JAM重组自交系 | - | 否 | 图位克隆 | [ |
| Rht23 | 5DL | AP2 转录因子 | NAUH164(‘苏麦3’经EMS诱变) | - | 是 | 图位克隆 | [ |
| Rht24 | 6A | GA2oxA9 | ‘京冬8号’和‘矮抗58’重组自交系 | 是 | 是 | 图位克隆 | [ |
| Rht25 | 6AS | PLATZ-A1 | ‘UC1110’和‘PI610750’重组自交系 | 是 | 是 | 图位克隆 | [ |
| Rht26 | 3DL | - | ‘中麦175’和‘轮选987’重组自交系 | - | 是 | 图位克隆 | [ |
| 基因 | 等位基因 | 标记 | 染色体 | 序列(5′→3′) | 大小/bp | 退火温度/℃ | 参考文献 |
|---|---|---|---|---|---|---|---|
| Rht-B1 | Rht-B1a | BF-WR1 | 4B | 5′-GGTAGGGAGGCGAGAGGCGAG-3′ 5′-CATCCCCATGGCCATCTCGAGCTG-3′ | 237 | 63 | [ |
| Rht-B1b | BF-MR1 | 5′-GGTAGGGAGGCGAGAGGCGAG-3′ 5′-CATCCCCATGGCCATCTCGAGCTA-3′ | 237 | 63 | [ | ||
| Rht-D1 | Rht-D1a | DF2-WR2 | 4D | 5′-GGCAAGCAAAAGCTTCGCG-3′ 5′-GGCCATCTCGAGCTGCAC-3′ | 264 | 63 | [ |
| Rht-D1b | DF-MR2 | 5′-CGCGCAATTATTGGCCAGAGATAG-3′ 5′-CCCCATGGCCATCTCGAGCTGCTA-3′ | 254 | 63 | [ | ||
| Rht 4 | WMC317 | 2BL | 5′-TGCTAGCAATGCTCCGGGTAAC-3′ 5′-TCACGAAACCTTTTCCTCCTCC-3′ | 170 | 61 | [ | |
| Rht 5 | BARC102 | 3BS | 5′-GGAGAGGACCTGCTAAAATCGAAGACA-3′ 5′-GCGTTTACGGATCAGTGTTGGAGA-3′ | 200 | 52 | [ | |
| Rht 8 | Xgwm261 | 2DS | 5′-CTCCCTGTACGCCTAAGGC-3′ 5′-CTCGCGCTACTAGCCATTG-3′ | 192 | 61 | [ | |
| Rht 9 | BARC151 | 5′-TGAGGAAAATGTCTCTATAGCATCC-3′ 5′-CGCATAAACACCTTCGCTCTTCCACTC-3′ | 220 | 55 | [ | ||
| Rht 12 | WMC410 | 5AL | 5′-CGCATAAACACCTTCGCTCTTCCACTC-3′ 5′-CGCATAAACACCTTCGCTCTTCCACTC-3′ | 114 | 61 | [ | |
| Rht 13 | WMS577 | 7BS | 5′-ATGGCATAATTTGGTGAAATTG-3′ 5′-TGTTTCAAGCCCAACTTCTATT-3′ | 130 | 55 | [ |
Table 3 Molecular markers and primers for detecting wheat dwarf genes
| 基因 | 等位基因 | 标记 | 染色体 | 序列(5′→3′) | 大小/bp | 退火温度/℃ | 参考文献 |
|---|---|---|---|---|---|---|---|
| Rht-B1 | Rht-B1a | BF-WR1 | 4B | 5′-GGTAGGGAGGCGAGAGGCGAG-3′ 5′-CATCCCCATGGCCATCTCGAGCTG-3′ | 237 | 63 | [ |
| Rht-B1b | BF-MR1 | 5′-GGTAGGGAGGCGAGAGGCGAG-3′ 5′-CATCCCCATGGCCATCTCGAGCTA-3′ | 237 | 63 | [ | ||
| Rht-D1 | Rht-D1a | DF2-WR2 | 4D | 5′-GGCAAGCAAAAGCTTCGCG-3′ 5′-GGCCATCTCGAGCTGCAC-3′ | 264 | 63 | [ |
| Rht-D1b | DF-MR2 | 5′-CGCGCAATTATTGGCCAGAGATAG-3′ 5′-CCCCATGGCCATCTCGAGCTGCTA-3′ | 254 | 63 | [ | ||
| Rht 4 | WMC317 | 2BL | 5′-TGCTAGCAATGCTCCGGGTAAC-3′ 5′-TCACGAAACCTTTTCCTCCTCC-3′ | 170 | 61 | [ | |
| Rht 5 | BARC102 | 3BS | 5′-GGAGAGGACCTGCTAAAATCGAAGACA-3′ 5′-GCGTTTACGGATCAGTGTTGGAGA-3′ | 200 | 52 | [ | |
| Rht 8 | Xgwm261 | 2DS | 5′-CTCCCTGTACGCCTAAGGC-3′ 5′-CTCGCGCTACTAGCCATTG-3′ | 192 | 61 | [ | |
| Rht 9 | BARC151 | 5′-TGAGGAAAATGTCTCTATAGCATCC-3′ 5′-CGCATAAACACCTTCGCTCTTCCACTC-3′ | 220 | 55 | [ | ||
| Rht 12 | WMC410 | 5AL | 5′-CGCATAAACACCTTCGCTCTTCCACTC-3′ 5′-CGCATAAACACCTTCGCTCTTCCACTC-3′ | 114 | 61 | [ | |
| Rht 13 | WMS577 | 7BS | 5′-ATGGCATAATTTGGTGAAATTG-3′ 5′-TGTTTCAAGCCCAACTTCTATT-3′ | 130 | 55 | [ |
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